Local view for "http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugs/DB02078"
Predicate | Value (sorted: default) |
---|---|
rdfs:label |
"1-Methoxy-2-[2-(2-Methoxy-Ethoxy]-Ethane"
|
rdf:type | |
ns1:description |
"
experimental
This compound belongs to the polyamines. These are compounds containing more than one amine group.
Polyamines
Organic Compounds
Organonitrogen Compounds
Amines
Polyamines
Ethers
logP
-0.09
ALOGPS
logS
-1
ALOGPS
Water Solubility
1.67e+01 g/l
ALOGPS
logP
-0.016
ChemAxon
IUPAC Name
2,5,8,11-tetraoxadodecane
ChemAxon
Traditional IUPAC Name
triglyme
ChemAxon
Molecular Weight
178.2261
ChemAxon
Monoisotopic Weight
178.120509064
ChemAxon
SMILES
COCCOCCOCCOC
ChemAxon
Molecular Formula
C8H18O4
ChemAxon
InChI
InChI=1S/C8H18O4/c1-9-3-5-11-7-8-12-6-4-10-2/h3-8H2,1-2H3
ChemAxon
InChIKey
InChIKey=YFNKIDBQEZZDLK-UHFFFAOYSA-N
ChemAxon
Polar Surface Area (PSA)
36.92
ChemAxon
Refractivity
46.14
ChemAxon
Polarizability
20.81
ChemAxon
Rotatable Bond Count
9
ChemAxon
H Bond Acceptor Count
4
ChemAxon
H Bond Donor Count
0
ChemAxon
pKa (strongest basic)
-3.5
ChemAxon
Physiological Charge
0
ChemAxon
Number of Rings
0
ChemAxon
Bioavailability
1
ChemAxon
Rule of Five
true
ChemAxon
Ghose Filter
true
ChemAxon
ChEBI
44842
PubChem Compound
8189
PubChem Substance
46505275
ChemSpider
13835222
PDB
PG5
BE0001484
Outer-membrane lipoprotein LolB
Shigella flexneri
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
unknown
Outer-membrane lipoprotein LolB
Cell wall/membrane/envelope biogenesis
Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the lolA protein
lolB
Cell outer membrane; lipid-anchor
None
9.19
23551.0
Shigella flexneri
GenBank Gene Database
AE005674
UniProtKB
P61322
UniProt Accession
LOLB_SHIFL
Outer-membrane lipoprotein lolB precursor
>Outer-membrane lipoprotein lolB precursor
MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQDVRNLNQYQTRGAFAY
ISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGNVQLVDNKGQRYTADDAEE
MIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEITYSQNGKNWKVVYGGYDTKT
QPAMPANMELTDGGQRIKLKMDNWIVK
>624 bp
TTATTTCACTATCCAGTTATCCATTTTTAACTTGATGCGTTGACCACCGTCGGTGAGTTC
CATATTGGCTGGCATCGCAGGTTGCGTTTTGGTGTCATAACCACCATAAACAACCTTCCA
GTTTTTGCCATTCTGGCTGTAGGTAATTTCGCTCAGGCGGTACTGGTCGTCCAGTTTGTA
GTCGGTTGCATCACCCGGTAAACCTAAAATCCACTGGCGCAAGCTGTTGAGCGGAATTGG
CATTCCGGTCAATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGACCTTT
ATTGTCGACCAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAA
TGGGTTAGTGAGCAGCAGACGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGC
GTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTCTGATACTGATTAAG
ATTGCGCACGTCTTGCTGATGCTGACGCCATTGTGGCGAATCCGGGCTTTTGCCAGGACC
TTTGGGCGTGGTAACGGAACAGGCAGTGAGCACAAGAGCAGCCAGCGGTAGCAGGCGGAT
AAGACGAAAATCGGGCAGGGGCAT
PF03550
LolB
component
outer membrane
component
outer membrane (sensu Gram-negative Bacteria)
component
cell
component
membrane
process
physiological process
process
cellular physiological process
process
transport
process
protein transport
BE0004295
Profilin-2
Human
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Profilin-2
Involved in actin binding
Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. By binding to PIP2, it inhibits the formation of IP3 and DG
PFN2
3q25.1-q25.2
Cytoplasm, cytoskeleton
None
7.04
15046.2
Human
HUGO Gene Nomenclature Committee (HGNC)
GNC:8882
GeneCards
PFN2
GenBank Gene Database
L10678
GenBank Protein Database
190388
UniProtKB
P35080
UniProt Accession
PROF2_HUMAN
Profilin II
>Profilin-2
MAGWQSYVDNLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPIEIDMIVGKDREGFF
TNGLTLGAKKCSVIRDSLYVDGDCTMDIRTKSQGGEPTYNVAVGRAGRVLVFVMGKEGVH
GGGLNKKAYSMAKYLRDSGF
>423 bp
ATGGCCGGTTGGCAGAGCTACGTGGATAACCTGATGTGCGATGGCTGCTGCCAGGAGGCC
GCCATTGTCGGCTACTGCGACGCCAAATACGTCTGGGCAGCCACGGCCGGGGGCGTCTTT
CAGAGCATTACGCCAATAGAAATAGATATGATTGTAGGAAAAGACCGGGAAGGTTTCTTT
ACCAACGGTTTGACTCTTGGCGCGAAGAAATGCTCAGTGATCAGAGATAGTCTATACGTC
GATGGTGACTGCACAATGGACATCCGGACAAAGAGTCAAGGTGGGGAGCCAACATACAAT
GTGGCTGTCGGCAGAGCTGGTAGAGCATTGGTTATAGTCATGGGAAAGGAAGGTGTCCAC
GGAGGCACACTTAACAAGAAAGCATATGAACTCGCTTTATACCTGAGGAGGTCTGATGTG
TAA
PF00235
Profilin
component
organelle
component
non-membrane-bound organelle
component
intracellular non-membrane-bound organelle
component
cytoskeleton
component
actin cytoskeleton
function
binding
function
cytoskeletal protein binding
function
actin binding
function
protein binding
process
organelle organization and biogenesis
process
cytoskeleton organization and biogenesis
process
physiological process
process
cellular physiological process
process
cell organization and biogenesis
process
actin filament-based process
process
actin cytoskeleton organization and biogenesis
BE0004296
Outer-membrane lipoprotein LolB
Escherichia coli (strain K12)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Outer-membrane lipoprotein LolB
Cell wall/membrane/envelope biogenesis
Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the lolA protein. Essential for E.coli viability
lolB
Cell outer membrane
None
9.19
23550.6
Escherichia coli (strain K12)
GeneCards
lolB
GenBank Gene Database
M77237
GenBank Protein Database
290462
UniProtKB
P61320
UniProt Accession
LOLB_ECOLI
>Outer-membrane lipoprotein lolB
MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQDVRNLNQYQTRGAFAY
ISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGNVQLVDNKGQRYTADDAEE
MIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEITYSQNGKNWKVVYGGYDTKT
QPAMPANMELTDGGQRIKLKMDNWIVK
>69 bp
ATGTCTGCGGGAAATAATACCAACGTTGATAGGGTTAGTCTGCTTGCATCATACATACAG
GATGCGTAA
PF03550
LolB
component
cell
component
membrane
component
outer membrane
component
outer membrane (sensu Gram-negative Bacteria)
process
cellular physiological process
process
transport
process
protein transport
process
physiological process
BE0004297
Uncharacterized protein
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Uncharacterized protein
Translation, ribosomal structure and biogenesis
AGR_C_2535
None
5.15
16232.6
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GenBank Gene Database
AE007869
GenBank Protein Database
15154859
UniProtKB
A9CJ63
UniProt Accession
A9CJ63_AGRT5
>Putative uncharacterized protein
MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVD
VASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLI
ATVLGEPGRHARAAVGMASLPFNASVEIDAIVEIDV
>822 bp
GTGGAGAACAAAAAAAGCTTCTTCCATCTGCACCTGATTTCGGACTCGACGGGAGAGACT
CTGATGTCGGCCGGCCGCGCCGTCTCGGCGCAGTTTCATACATCCATGCCGGTGGAACAT
GTCTATCCGATGATCCGCAACCAGAAGCAGCTCGCGCAGGTCATCGATCTCATCGACAAG
GAGCCCGGCATTGTTCTTTATACAATCGTTGATCAGCAGCTGGCGGAATTCCTGGATCTG
CGCTGCCATGCGATTGGCGTGCCCTGCGTCAACGTTCTCGAACCGATCATCGGCATTTTC
CAGACCTATCTCGGCGCGCCGTCCAGGCGGCGGGTGGGTGCGCAACACGCGCTGAATGCC
GATTATTTCGCGCGGATCGAAGCACTCAATTTCGCCATGGACCATGATGACGGGCAGATG
CCGGAGACCTATGACGATGCGGATGTCGTCATCATCGGCATCAGCCGCACGTCGAAAACA
CCAACCAGCATCTATCTTGCTAACAGGGGCATAAAGACTGCCAATATCCCGGTCGTTCCC
AATGTGCCTTTGCCCGAAAGCCTATATGCCGCGACCCGGCCGTTGATCGTCGGTCTCGTC
GCGACATCGGATCGCATATCGCAGGTTCGTGAGAACAGGGATCTGGGTACAACCGGCGGA
TTTGACGGTGGCCGTTACACGGATCGCGCCACCATCATGGAAGAGCTGAAATATGCGCGT
GCGCTCTGCGCCCGCAACAATTGGCCGCTGATCGACGTCACACGCCGTTCCATCGAGGAA
ACGGCCGCGGCGATCCTTGCCCTGCGCCCGAGGACGCGATAA
PF01042
Ribonuc_L-PSP
BE0004298
Serine acetyltransferase
Yersinia pestis
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Serine acetyltransferase
Amino acid transport and metabolism
cysE
None
6.51
29172.2
Yersinia pestis
GeneCards
cysE
GenBank Gene Database
AL590842
GenBank Protein Database
115345833
UniProtKB
Q0WKM4
UniProt Accession
Q0WKM4_YERPE
>Serine acetyltransferase
MSSEELEQVWSNIKSEARALAECEPMLASFFHATLLKHENLGSALSYILANKLANPIMPA
IAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYSTPLLYLKGFHALQAYRIGHWL
WAQDRKALAIYLQNQVSVAFGVDIHPAATIGCGIMLDHATGIVIGETAVVENDVSILQSV
TLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQSVPAHTTAAGVP
ARIVGKPESDKPSLDMDQHFNGSIQGFEYGDGI
>993 bp
ATGAAAAAACAATTTATCCAAAAACAACAACAAATCAGCTTCGTAAAATCATTCTTTTCC
CGCCAATTAGAGCAACAACTTGGCTTGATCGAAGTCCAGGCTCCTATTTTGAGCCGTGTG
GGTGATGGAACCCAAGATAACCTTTCTGGTTCTGAGAAAGCGGTACAGGTAAAAGTTAAG
TCATTGCCGGATTCAACTTTTGAAGTTGTACATTCATTAGCGAAGTGGAAACGTAAAACC
TTAGGGCGTTTTGATTTTGGTGCTGACCAAGGGGTGTATACCCATATGAAAGCATTGCGC
CCAGATGAAGATCGCCTGAGTGCTATTCATTCTGTATATGTAGATCAGTGGGATTGGGAA
CGGGTTATGGGGGACGGTGAACGTAACCTGGCTTACCTGAAATCGACTGTTAACAAGATT
TATGCAGCGATTAAAGAAACTGAAGCGGCGATCAGTGCTGAGTTTGGTGTGAAGCCTTTC
CTGCCGGATCATATTCAGTTTATCCACAGTGAAAGCCTGCGGGCCAGATTCCCTGATTTA
GATGCTAAAGGCCGTGAACGTGCAATTGCCAAAGAGTTAGGTGCTGTCTTCCTTATAGGG
ATTGGTGGCAAATTGGCAGATGGTCAATCCCATGATGTTCGTGCGCCAGATTATGATGAT
TGGACCTCTCCGAGTGCGGAAGGTTTCTCTGGATTAAACGGCGACATTATTGTCTGGAAC
CCAATATTGGAAGATGCCTTTGAGATATCTTCTATGGGAATTCGTGTTGATGCCGAAGCT
CTTAAGCGTCAGTTAGCCCTGACTGGCGATGAAGACCGCTTGGAACTGGAATGGCATCAA
TCACTGTTGCGCGGTGAAATGCCACAAACTATCGGGGGAGGTATTGGTCAGTCCCGCTTA
GTGATGTTATTGCTGCAGAAACAACATATTGGTCAGGTGCAATGTGGTGTTTGGGGCCCT
GAAATCAGCGAGAAAGTTGATGGCCTGCTGTAA
PF00132
Hexapep
PF06426
SATase_N
component
cell
component
intracellular
component
cytoplasm
function
O-acyltransferase activity
function
transferase activity
function
serine O-acyltransferase activity
function
serine O-acetyltransferase activity
function
transferase activity, transferring acyl groups
function
catalytic activity
function
transferase activity, transferring groups other than amino-acyl groups
function
acyltransferase activity
process
amino acid and derivative metabolism
process
serine family amino acid metabolism
process
physiological process
process
metabolism
process
cellular metabolism
process
L-serine metabolism
process
amino acid metabolism
process
cysteine biosynthesis from serine
BE0000839
Tyrosine-protein kinase Fyn
Human
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Tyrosine-protein kinase Fyn
Involved in protein kinase activity
Implicated in the control of cell growth
FYN
6q21
Cell membrane. Present and active in lipid rafts
None
6.65
60631.0
Human
HUGO Gene Nomenclature Committee (HGNC)
HGNC:4037
GenAtlas
FYN
GeneCards
FYN
GenBank Gene Database
M14333
GenBank Protein Database
338228
UniProtKB
P06241
UniProt Accession
FYN_HUMAN
EC 2.7.10.2
p59-Fyn
Protooncogene Syn
SLK
>Proto-oncogene tyrosine-protein kinase Fyn
GCVQCKDKEATKLTEERDGSLNQSSGYRYGTDPTPQHYPSFGVTSIPNYNNFHAAGGQGL
TVFGGVNSSSHTGTLRTRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWE
ARSLTTGETGYIPSNYVAPVDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETT
KGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCR
LVVPCHKGMPRLTDLSVKTKDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL
KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRA
LKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYT
ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER
GYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPGENL
>1614 bp
ATGGGCTGTGTGCAATGTAAGGATAAAGAAGCAACAAAACTGACGGAGGAGAGGGACGGC
AGCCTGAACCAGAGCTCTGGGTACCGCTATGGCACAGACCCCACCCCTCAGCACTACCCC
AGCTTCGGTGTGACCTCCATCCCCAACTACAACAACTTCCACGCAGCCGGGGGCCAAGGA
CTCACCGTCTTTGGAGGTGTGAACTCTTCGTCTCATACGGGGACCTTGCGTACGAGAGGA
GGAACAGGAGTGACACTCTTTGTGGCCCTTTATGACTATGAAGCACGGACAGAAGATGAC
CTGAGTTTTCACAAAGGAGAAAAATTTCAAATATTGAACAGCTCGGAAGGAGATTGGTGG
GAAGCCCGCTCCTTGACAACTGGAGAGACAGGTTACATTCCCAGCAATTATGTGGCTCCA
GTTGACTCTATCCAGGCAGAAGAGTGGTACTTTGGAAAACTTGGCCGAAAAGATGCTGAG
CGACAGCTATTGTCCTTTGGAAACCCAAGAGGTACCTTTCTTATCCGCGAGAGTGAAACC
ACCAAAGGGTCCTATTCACTTTCTATCCGTGATTGGGATGATATGAAAGGAGACCATGTC
AAACATTATAAAATTCGCAAACTTGACAATGGTGGATACTACATTACCACCCGGGCCCAG
TTTGAAACACTTCAGCAGCTTGTACAACATTACTCAGAGAGAGCTGCAGGTCTCTGCTGC
CGCCTAGTAGTTCCCTGTCACAAAGGGATGCCAAGGCTTACCGATCTGTCTGTCAAAACC
AAAGATGTCTGGGAAATCCCTCGAGAATCCCTGCAGTTGATCAAGAGACTGGGAAATGGG
CAGTTTGGGGAAGTATGGATGGGTACCTGGAATGGAAACACAAAAGTAGCCATAAAGACT
CTTAAACCAGGCACAATGTCCCCCGAATCATTCCTTGAGGAAGCGCAGATCATGAAGAAG
CTGAAGCACGACAAGCTGGTCCAGCTCTATGCAGTGGTGTCTGAGGAGCCCATCTACATC
GTCACCGAGTATATGAACAAAGGAAGTTTACTGGATTTCTTAAAAGATGGAGAAGGAAGA
GCTCTGAAATTACCAAATCTTGTGGACATGGCAGCACAGGTGGCTGCAGGAATGGCTTAC
ATCGAGCGCATGAATTATATCCATAGAGATCTGCGATCAGCAAACATTCTAGTGGGGAAT
GGACTCATATGCAAGATTGCTGACTTCGGATTGGCCCGATTGATAGAAGACAATGAGTAC
ACAGCAAGACAAGGTGCAAAGTTCCCCATCAAGTGGACGGCCCCCGAGCGAGCCCTGTAC
GGGAGGTTCACAATCAAGTCTGACGTGTGGTCTTTTGGAATCTTACTCACAGAGCTGGTC
ACCAAAGGAAGAGTGCCATACCCAGGCATGAACAACCGGGAGGTGCTGGAGCAGGTGGAG
CGAGGCTACAGGATGCCCTGCCCGCAGGACTGCCCCATCTCTCTGCATGAGCTCATGATC
CACTGCTGGAAAAAGGACCCTGAAGAACGCCCCACTTTTGAGTACTTGCAGAGCTTCCTG
GAAGACTACTTTACCGCGACAGAGCCCCAGTACCAACCTGGTGAAAACCTGTAA
PF07714
Pkinase_Tyr
PF00017
SH2
PF00018
SH3_1
function
catalytic activity
function
protein-tyrosine kinase activity
function
ATP binding
function
transferase activity, transferring phosphorus-containing groups
function
kinase activity
function
nucleotide binding
function
protein kinase activity
function
purine nucleotide binding
function
adenyl nucleotide binding
function
binding
function
transferase activity
process
physiological process
process
cellular process
process
cell communication
process
metabolism
process
signal transduction
process
macromolecule metabolism
process
biopolymer metabolism
process
biopolymer modification
process
protein modification
process
intracellular signaling cascade
process
protein amino acid phosphorylation
BE0001399
Peptidyl-prolyl cis-trans isomerase F, mitochondrial
Human
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Peptidyl-prolyl cis-trans isomerase F, mitochondrial
Posttranslational modification, protein turnover, chaperones
PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PPIF
10q22-q23
Mitochondrion; mitochondrial matrix
None
9.95
22040.0
Human
HUGO Gene Nomenclature Committee (HGNC)
HGNC:9259
GenAtlas
PPIF
GeneCards
PPIF
GenBank Gene Database
M80254
GenBank Protein Database
181274
UniProtKB
P30405
UniProt Accession
PPIF_HUMAN
Cyclophilin F
EC 5.2.1.8
Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor
PPIase
Rotamase
>Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor
MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLG
RVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI
YGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDV
VKKIESFGSKSGRTSKKIVITDCGQLS
>624 bp
ATGCTGGCGCTGCGCTGCGGCTCCCGCTGGCTCGGCCTGCTCTCCGTCCCGCGCTCCGTG
CCGCTGCGCCTCCCCGCGGCCCGCGCCTGCAGCAAGGGCTCCGGCGACCCGTCCTCTTCC
TCCTCCTCCGGGAACCCGCTCGTGTACCTGGACGTGGACGCCAACGGGAAGCCGCTCGGC
CGCGTGGTGCTGGAGCTGAAGGCAGATGTCGTCCCAAAGACAGCTGAGAACTTCAGAGCC
CTGTGCACTGGTGAGAAGGGCTTCGGCTACAAAGGCTCCACCTTCCACAGGGTGATCCCT
TCCTTCATGTGCCAGGCGGGCGACTTCACCAACCACAATGGCACAGGCGGGAAGTCCATC
TACGGAAGCCGCTTTCCTGACGAGAACTTTACACTGAAGCACGTGGGGCCAGGTGTCCTG
TCCATGGCTAATGCTGGTCCTAACACCAACGGCTCCCAGTTCTTCATCTGCACCATAAAG
ACAGACTGGTTGGATGGCAAGCATGTTGTGTTCGGTCACGTCAAAGAGGGCATGGACGTC
GTGAAGAAAATAGAATCTTTCGGCTCTAAGAGTGGGAGGACATCCAAGAAGATTGTCATC
ACAGACTGTGGCCAGTTGAGCTAA
PF00160
Pro_isomerase
process
macromolecule metabolism
process
protein metabolism
process
cellular protein metabolism
process
protein folding
process
physiological process
process
metabolism
BE0004299
Transcriptional regulator, GntR family
Bacillus cereus (strain ATCC 10987)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Transcriptional regulator, GntR family
Transcription
BCE_3424
Cytoplasmic
None
6.82
27781.9
Bacillus cereus (strain ATCC 10987)
GenBank Gene Database
AE017194
GenBank Protein Database
42734997
UniProtKB
Q734I1
UniProt Accession
Q734I1_BACC1
>Transcriptional regulator, GntR family
MASGSTQVKYLGIYQKMKQQILDGEYKINEKIPSSPILAEEFGVSVLTIKKALDLLVRDG
YIIRRRGSGTVVQDWRQQEKARMIQTLTGTKAVYGSEVESKIIEFTIVGADEIIAEKLGI
SVGDFVYKIIRLRIIHSIPTIMEHTWMPIAVIPGVEASVLEESIYSYIQNKLGLKVGTSV
VRVKGIRPDDKEKQFMNLTNQDFLMRVEQVAYLTDGRTFEYSYADHLPETFEFETVITAK
SYKEA
>1341 bp
TTGGAAAACATCTCTGATTTATGGAACAGCGCCTTAAAAGAACTAGAAAAAAAGGTCAGT
AAACCAAGCTATGAAACATGGTTAAAATCAACGACCGCACATAATTTAAAGAAAGATGTA
TTAACAATTACGGCTCCAAATGAATTCGCCCGCGATTGGCTAGAATCTCATTATTCAGAG
CTAATTTCGGAAACACTTTATGATTTAACAGGGGCAAAACTAGCTATTCGCTTTATTATT
CCCCAAAGTCAAGCTGAAGAGGAGATCGATCTTCCTCCTTCTAAACCGAATTCAGCACAA
GATGATTCTAATCATTTACCACAGAGTATGCTAAATCCAAAATATACGTTTGATACGTTT
GTTATTGGCTCTGGTAACCGTTTTGCTCACGCTGCTTCATTGGCCGTAGCCGAAGCGCCA
GCTAAAGCATATAATCCCCTCTTTATTTATGGGGGAGTTGGACTTGGAAAGACCCATTTA
ATGCATGCAATTGGTCATTATGTAATTGAACATAACCCAAATGCCAAAGTTGTATATTTA
TCATCAGAAAAATTTACAAATGAATTTATTAATTCTATTCGTGATAATAAAGCAGTCGAT
TTTCGTAATAAATACCGCAATGTAGATGTTTTATTGATAGATGATATTCAATTTTTAGCG
GGAAAAGAACAAACTCAAGAAGAGTTTTTCCATACATTCAATGCATTACACGAAGAAAGT
AAACAAATTGTAATTTCCAGTGATCGGCCACCAAAAGAAATTCCAACTTTAGAAGATCGT
CTTCGTTCTCGCTTTGAATGGGGACTCATTACGGATATTACGCCACCAGATTTAGAAACA
CGAATTGCAATTTTGCGCAAAAAAGCAAAGGCTGAAGGACTTGATATACCAAATGAGGTC
ATGCTTTATATTGCAAATCAAATCGATTCAAATATTCGTGAACTAGAAGGTGCACTCATC
CGAGTTGTAGCTTATTCATCTTTAATTAATAAAGATATTAATGCTGATTTAGCAGCTGAA
GCACTTAAAGATATTATTCCAAATTCTAAACCAAAAATTATCTCCATTTATGATATTCAA
AAAGCTGTCGGAGATGTTTATCAAGTAAAATTGGAAGATTTCAAGGCGAAAAAGCGAACG
AAATCAGTTGCCTTTCCTCGCCAAATTGCAATGTATTTATCACGTGAACTGACAGACTCC
TCCTTACCTAAAATAGGTGAAGAATTCGGTGGACGCGATCATACAACCGTTATCCATGCT
CATGAAAAAATTTCTAAGCTACTTAAGACGGACACGCAATTACAAAAGCAAGTTGAAGAA
ATTAACGATATTTTAAAGTAG
PF00392
GntR
PF07702
UTRA
component
cell
component
intracellular
function
DNA binding
function
binding
function
transcription regulator activity
function
nucleic acid binding
function
transcription factor activity
process
regulation of biological process
process
regulation of physiological process
process
regulation of metabolism
process
regulation of cellular metabolism
process
regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
process
regulation of transcription
process
regulation of transcription, DNA-dependent
BE0004300
ABC transporter, periplasmic substrate-binding protein
Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
ABC transporter, periplasmic substrate-binding protein
Amino acid transport and metabolism
SPO2066
None
4.87
67355.2
Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
GenBank Gene Database
CP000031
GenBank Protein Database
56676666
UniProtKB
Q5LRQ9
UniProt Accession
Q5LRQ9_RUEPO
>ABC transporter, periplasmic substrate-binding protein
MRPDYFRPFRPLTAGIALLLGASFADAESRHAIAMYGAPALPPDFVSLPYANPDAPKGGR
VVFGNTGGFDSLNPFAQKGTFPWQMPFWSYESLMGRSWDEPFTLYGLLAESVEVPPDRAW
VEFTLREEARFSDGSPVTVEDVIWSYQTLGTEGHLRYRGFWSRIASIEATGPRSLRITFA
DEDRELAMLAGLRPILQKAQWEGRSLSEGNIHDIPIGTGPYVVSAYEPGRYVTFARNPDY
WGADLGFRRGTMNFDEMRIDFFGDGTVLMEAFKAGELSAIREFNAQKWDSAYDFPAAQRG
DVIKTEIAHGKPSGMTGFVINTRRAPFDDWRLREALLLAFNFEFINDTVTGGVMPRITSY
FSGTDLAYRPGTASGREAELLAPFAADLPPGTLEGYALPQGDGTARNRTNLRRAAQFLEQ
AGFRIEQGQLLGPDGAPLALRFLLRQGDSDMQTVLEIYTRALERLGIAAQIEKVDNAQYT
ARVAELDFDLTPFRRDLSLSPGNEQRLYWGSHSAGQPGTRNLMGAASPAIDAMIDRMLAA
TTEDELTAATRALDRVLTAGRYVIPIWRFDVGRIAHIRQLRFPPNPPIYGDGPQYMPDVW
WYQD
>1869 bp
GTGAAACATTCGGATTTCGATATTGTCGTGATCGGGGCCGGACATGCCGGCGCCGAGGCT
GCACATGCTGCGGCACGCATGGGAATGCGTACTGCCTTGGTTTCCCTGTCCGAACGCGAC
ATTGGCGTGATGTCCTGTAACCCGGCTATTGGCGGTTTGGGTAAGGGGCATCTGGTTCGC
GAGATCGACGCACTTGACGGGGTCATGGGGCGGGTGGCCGACAAGGCCGGGATTCAATTT
CGTCTGCTCAATCGGCGCAAGGGTCCTGCGGTCCAGGGGCCGCGCGCTCAGGCCGATCGC
AAGCTCTATCGCCTGGCGATGCAGGAAGAAATGCGCAATCGCCCCGGACTGACCATCGTC
GAGGGCGAGGTTACTGATTTTCGAATGCAAGGTGATCGCGTTGCCGGCGTCGTTCTGGCC
GATGGGTCCGAGATTGCATCGCAAGCCGTGATCTTGACCTCGGGCACGTTCCTGCGCGGG
ATCATTCATATTGGCGATGTTTCGCGCCCCGGTGGGCGGATGGGTGACCGACCTTCAGTT
CCGCTTGCCGAAAGGCTGGATGGATTTGCGTTACCGATGGGGCGACTAAAGACCGGAACG
CCGCCGCGACTGGACGGACGCACCATAGACTGGTCTATCCTCGAGCGTCAGGACGGGGAT
GACGATCCGGTGCTGTTCTCGTTCCTGTCAAAAGGGGCCTATGCGCGTCAGATCGCCTGC
GGTATCACGCATACCAACGCCCAGACGCATGAGATCATTCGCAAAAACCTGTCCCGTTCC
GCGATGTATGGCGGACATATCGAAGGCGTCGGCCCTCGTTACTGCCCCTCGATCGAGGAC
AAAATCGTGCGTTTCGCTGACAAGGATTCGCATCAGATCTTTCTTGAGCCCGAGGGGCTG
GAAGATCACACTGTCTATCCGAACGGTATCTCGACCTCGTTGCCGGTCGACGTGCAAGAG
GACTATGTCCGTTCGATCCGGGGGCTGGAACAGGTTGAGATCTTGCAGCCCGGTTACGCG
ATCGAATACGACTATGTTGATCCCCGCGCGCTCACGTCGCAACTGTCTCTGCCGAATGTT
CCGGGCTTGTACCTAGCCGGTCAGATCAATGGAACAACCGGGTATGAAGAGGCTGCGGCG
CAGGGAATGGTTGCCGGGTTGAACGCAGCCACCGCGATTTTGGGTCACGAACCGGTCCCC
TTCAGTCGTGCCAACAGCTATATCGGTGTGATGATCGACGATCTGACCACACGCGGTGTG
GCAGAGCCCTATCGCATGTTCACCTCGCGGGCCGAATTCCGCCTGTCCTTGCGTGCGGAT
AACGCGGATCAGCGGCTGACGCCCTTGGGATTGGAATTGGGTTGTGTCGGTGACGAACGG
CGCGACGTCTTTGCGCGTAAGGCAGAGAAACTGGCGACAGCCTCGGCGCTGCTCGATCAG
AGCAGCTTTAGCCCCAAAGAGATTGCCACAGCTGGTATCACCATCAGTCAGGACGGCAAT
CGGAGAAACGGCTTCGCTGTCCTCGCCTTTCCGGACGTCAGGTTTGACGACCTTGTGCCA
CTAATCCCGGAACTTGCAGACACCGACGCCGAAACCCGCGCGCAGGTAGAGCGTGATGCG
CTTTATGCCAATTACATCGCGCGGCAGGAACGGGATGTTGAGGCGATGAAACGGGATGAG
GCGCTGGTCATTCCGATCGACTTCAACTTTTCTGCCCTCGATGGGTTGTCAAATGAGTTG
AAGCAAAAACTCACATCCGCGCGACCGGAAAATATCGCGCAGGCCGGGCGTGTTGAGGGG
ATGACGCCAGCGGCGCTTGCGCTCATCCTGGCCCGCCTTCGCCGTGGCGACCGAGCACGA
AGCGCATGA
PF00496
SBP_bac_5
function
transporter activity
process
cellular physiological process
process
transport
process
physiological process
BE0004301
Transketolase
Bacillus anthracis
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Transketolase
Carbohydrate transport and metabolism
tkt2
None
4.71
72408.7
Bacillus anthracis
GeneCards
tkt-2
GenBank Gene Database
AE016879
GenBank Protein Database
30253517
UniProtKB
Q81Y15
UniProt Accession
Q81Y15_BACAN
>Transketolase
MSHSIEQLSINTIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTQFMKHNPNNPTWFNRD
RFVLSAGHGSMLLYSLLHLSGYDVTMDDLKNFRQWGSKTPGHPEYGHTAGVDATTGPLGQ
GIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAHLQLGRL
VVLYDSNDISLDGDLNRSFSESVEDRYKAYGWQVIRVEDGNDIEAIAKAIEEAKADEKRP
TLIEVRTTIGFGSPNKSGKSASHGSPLGVEETKLTKEAYAWTAEQDFHVAEEVYENFRKT
VQDVGETAQAEWNTMLGEYAQAYPELANELQAAMNGLLPEGWEQNLPTYELGSKAATRNS
SGAVINAIAESVPSFFGGSADLAGSNKTYMNNEKDFTRDDYSGKNIWYGVREFAMGAAMN
GIALHGGLKTYGGTFFVFSDYLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTHEPIEQL
AALRAMPNVSVIRPADGNESVAAWRLALESTNKPTALVLTRQDLPTLEGAKDDTYEKVAK
GAYVVSASKKETADVILLATGSEVSLAVEAQKALAVDGVDASVVSMPSMDRFEAQTAEYK
ESVLPKAVTKRFAIEMGATFGWHRYVGLEGDVLGIDTFGASAPGEKIMEEYGFTVENVVR
KVKEML
>1341 bp
TTGGAAAACATCTCTGATTTATGGAACAGCGCCTTAAAAGAACTCGAAAAAAAGGTCAGT
AAACCAAGTTATGAAACATGGTTAAAATCAACAACCGCACATAATTTAAAGAAAGATGTA
TTAACAATTACGGCTCCAAATGAATTCGCCCGTGATTGGTTAGAATCTCATTATTCAGAG
CTAATTTCGGAAACACTTTATGATTTAACGGGGGCAAAATTAGCTATTCGCTTTATTATT
CCCCAAAGTCAAGCTGAAGAGGAGATTGATCTTCCTCCTGCTAAACCAAATGCAGCACAA
GATGATTCTAATCATTTACCACAGAGTATGCTAAACCCAAAATATACGTTTGATACATTT
GTTATTGGCTCTGGTAACCGTTTTGCTCACGCTGCTTCATTGGCCGTAGCCGAAGCGCCA
GCTAAAGCATATAATCCCCTCTTTATTTATGGGGGAGTTGGACTTGGAAAAACCCATTTA
ATGCATGCAATTGGCCATTATGTAATTGAACATAACCCAAATGCCAAAGTTGTATATTTA
TCATCAGAAAAATTTACAAATGAATTCATTAATTCTATTCGTGATAATAAAGCGGTCGAT
TTTCGTAATAAATACCGCAATGTAGATGTTTTATTGATAGATGATATTCAATTTTTAGCG
GGAAAAGAACAAACTCAAGAAGAGTTTTTCCATACATTCAATGCATTACACGAAGAAAGT
AAACAAATTGTAATTTCCAGTGATCGGCCACCAAAAGAAATTCCAACTTTAGAAGATCGT
CTTCGTTCTCGCTTTGAATGGGGACTCATTACGGATATTACGCCACCAGATTTAGAAACA
CGAATTGCGATTTTACGTAAAAAGGCAAAGGCTGAAGGACTTGATATACCAAATGAGGTC
ATGCTTTATATCGCAAATCAAATCGATTCAAATATTCGTGAACTAGAAGGTGCACTCATC
CGCGTTGTAGCTTATTCATCTTTAATTAACAAGGATATTAATGCTGATTTAGCAGCTGAA
GCACTTAAAGATATTATTCCAAATTCTAAACCAAAAATTATCTCCATTTATGATATTCAA
AAAGCTGTTGGAGATGTTTATCAAGTAAAATTAGAAGATTTCAAGGCGAAAAAGCGCACA
AAGTCAGTTGCCTTTCCTCGCCAAATTGCAATGTATTTGTCACGCGAACTGACAGATTCC
TCCTTACCTAAAATAGGTGAAGAATTTGGTGGACGTGATCATACAACCGTTATCCATGCC
CATGAAAAAATTTCTAAGCTACTTAAGACGGATACGCAATTACAAAAACAAGTTGAAGAA
ATTAACGATATTTTAAAGTAG
PF02779
Transket_pyr
PF02780
Transketolase_C
PF00456
Transketolase_N
component
cell
component
intrinsic to membrane
component
integral to membrane
component
membrane
function
transferase activity, transferring aldehyde or ketonic groups
function
signal transducer activity
function
transketolase activity
function
receptor activity
function
transmembrane receptor activity
function
G-protein coupled receptor activity
function
rhodopsin-like receptor activity
function
catalytic activity
function
transferase activity
process
signal transduction
process
cell surface receptor linked signal transduction
process
G-protein coupled receptor protein signaling pathway
process
cellular process
process
cell communication
"
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owl:sameAs |
All properties reside in the graph file:///home/swish/src/ClioPatria/guidelines/drugbank_small.nt
The resource does not appear as an object