Local view for "http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugs/DB02363"
Predicate | Value (sorted: default) |
---|---|
rdfs:label |
"2'-Monophosphoadenosine-5'-Diphosphate"
|
rdf:type | |
ns1:description |
"
experimental
This compound belongs to the purine ribonucleoside diphosphates. These are purine ribobucleotides with diphosphate group linked to the ribose moiety.
Purine Ribonucleoside Diphosphates
Organic Compounds
Organooxygen Compounds
Carbohydrates and Carbohydrate Conjugates
Glycosyl Compounds
Purine Ribonucleoside 2',5'-Bisphosphates
Organic Pyrophosphates
Purines and Purine Derivatives
Aminopyrimidines and Derivatives
Primary Aromatic Amines
Organic Phosphoric Acids
N-substituted Imidazoles
Organophosphate Esters
Oxolanes
Tetrahydrofurans
Secondary Alcohols
Ethers
Polyamines
organic pyrophosphate
purine
imidazopyrimidine
aminopyrimidine
pyrimidine
phosphoric acid ester
primary aromatic amine
n-substituted imidazole
organic phosphate
imidazole
azole
tetrahydrofuran
oxolane
secondary alcohol
ether
polyamine
organonitrogen compound
primary amine
alcohol
amine
logP
-1.1
ALOGPS
logS
-2
ALOGPS
Water Solubility
4.78e+00 g/l
ALOGPS
logP
-6.3
ChemAxon
IUPAC Name
[({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3-hydroxy-4-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid
ChemAxon
Traditional IUPAC Name
{[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3-hydroxy-4-(phosphonooxy)oxolan-2-yl]methoxy(hydroxy)phosphoryl}oxyphosphonic acid
ChemAxon
Molecular Weight
507.181
ChemAxon
Monoisotopic Weight
506.995745159
ChemAxon
SMILES
NC1=NC=NC2=C1N=CN2[C@@H]1O[C@@H](CO[P@](O)(=O)OP(O)(O)=O)[C@H](O)[C@H]1OP(O)(O)=O
ChemAxon
Molecular Formula
C10H16N5O13P3
ChemAxon
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(27-29(17,18)19)6(16)4(26-10)1-25-31(23,24)28-30(20,21)22/h2-4,6-7,10,16H,1H2,(H,23,24)(H2,11,12,13)(H2,17,18,19)(H2,20,21,22)/t4-,6-,7+,10+/m0/s1
ChemAxon
InChIKey
InChIKey=YPTPYQSAVGGMFN-FCIPNVEPSA-N
ChemAxon
Polar Surface Area (PSA)
279.13
ChemAxon
Refractivity
95.81
ChemAxon
Polarizability
38.59
ChemAxon
Rotatable Bond Count
8
ChemAxon
H Bond Acceptor Count
14
ChemAxon
H Bond Donor Count
7
ChemAxon
pKa (strongest acidic)
0.66
ChemAxon
pKa (strongest basic)
4.92
ChemAxon
Physiological Charge
-4
ChemAxon
Number of Rings
3
ChemAxon
Bioavailability
0
ChemAxon
MDDR-Like Rule
true
ChemAxon
PubChem Compound
46936366
PubChem Substance
46506433
ChemSpider
1747
PDB
ATR
BE0001445
Shikimate dehydrogenase
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
unknown
Shikimate dehydrogenase
Amino acid transport and metabolism
Shikimate + NADP(+) = 3-dehydroshikimate + NADPH
aroE
None
6.12
29760.0
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GenBank Gene Database
L42023
GenBank Protein Database
1573653
UniProtKB
P43876
UniProt Accession
AROE_HAEIN
EC 1.1.1.25
>Shikimate dehydrogenase
MDLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNI
TSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADNTDGIGLVTDLQRLNWLRPNQ
HVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQT
YDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFG
MLVAQAAHSFHLWRGVMPDFVSVYEQLKKAML
>819 bp
TCATAACATCGCCTTTTTAAGCTGTTCATAAACCGAGACAAAATCTGGCATTACGCCTCG
CCATAAATGGAAAGAATGTGCTGCTTGTGCGACTAACATTCCAAAGCCATCGCTAACATT
GGTTAAACCTAAACTTTTGCATAATGCAATAAATGGCGTGTCTGTGCCTTTCGCATATTG
CATATCATAAAAAGCCGAGCCCAATTTTAAAATTTCAGCATCAACTGAAGCCGTTCCACC
ACTTAATCCAGCGGAAGTTGCATTAATCACCAAATCATAAGTTTGTAGCGGAATCGAATC
CATAGAGACAGCTTGAATATTGCCGTAAGGCTGAAATCTTTCAGCTAATTCTTTGGTTTT
CGAAAAAGTGCGGTTAGCAAGCACAATGTTTTGTTGAGCTTGTAAAAGTGGCAATAATAC
GCCTTTTGTTGCTCCGCCCGCCCCCAAGATTAATACGTGCTGATTTGGACGAAGCCAATT
TAAACGTTGTAAATCCGTCACTAAGCCAATCCCATCAGTGTTATCCGCATAAAGTTTTCC
ATCATCGAGTTTTTTTAGCGTATTACAGGCTTCCGCCAGTTTTGCTCGTTGGCTATATTC
GTCTGCCAGCTGATAAGCGCGTTCTTTAAAAGGCGAAGTAATATTGCAACCTTTCGCACC
CTCCTCAAAAAATGCCAAAAGCTGTTGTTCAAAAGCATCAAGATCGCCTAATTTTGCAAT
GTATTCCATAGTTTGATGGGTTTGTGCGGCTAACTTATTTTGAATTAACGGCGATTTACT
TTGCGCAATCGGATTGCCCCACACAGCATAAAGATCCAT
PF01488
Shikimate_DH
PF08501
Shikimate_dh_N
component
cell
component
intracellular
component
cytoplasm
function
oxidoreductase activity
function
cofactor binding
function
shikimate 5-dehydrogenase activity
function
coenzyme binding
function
NADP binding
function
binding
function
catalytic activity
function
oxidoreductase activity, acting on CH-OH group of donors
function
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
process
amino acid metabolism
process
amino acid biosynthesis
process
amino acid and derivative metabolism
process
aromatic amino acid family biosynthesis
process
aromatic amino acid family biosynthesis, shikimate pathway
process
physiological process
process
metabolism
process
cellular metabolism
BE0003317
Ribonuclease pancreatic
Human
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
# Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/10592235
unknown
Ribonuclease pancreatic
Involved in nucleic acid binding
Endonuclease that catalyzes the cleavage of RNA on the 3' side of pyrimidine nucleotides. Acts on single stranded and double stranded RNA
RNASE1
14q11.2
Secreted protein
None
8.94
17644.0
Human
HUGO Gene Nomenclature Committee (HGNC)
HGNC:10044
GenAtlas
RNASE1
GenBank Gene Database
D26129
UniProtKB
P07998
UniProt Accession
RNAS1_HUMAN
EC 3.1.27.5
HP-RNase
RIB-1
Ribonuclease pancreatic precursor
RNase 1
RNase A
RNase UpI-1
>Ribonuclease pancreatic
MALEKSLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRR
RNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNGSRY
PNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST
>471 bp
ATGGCTCTGGAGAAGTCTCTTGTCCGGCTCCTTCTGCTTGTCCTGATACTGCTGGTGCTG
GGCTGGGTCCAGCCTTCCCTGGGCAAGGAATCCCGGGCCAAGAAATTCCAGCGGCAGCAT
ATGGACTCAGACAGTTCCCCCAGCAGCAGCTCCACCTACTGTAACCAAATGATGAGGCGC
CGGAATATGACACAGGGGCGGTGCAAACCAGTGAACACCTTTGTGCACGAGCCCCTGGTA
GATGTCCAGAATGTCTGTTTCCAGGAAAAGGTCACCTGCAAGAACGGGCAGGGCAACTGC
TACAAGAGCAACTCCAGCATGCACATCACAGACTGCCGCCTGACAAACGGCTCCAGGTAC
CCCAACTGTGCATACCGGACCAGCCCGAAGGAGAGACACATCATTGTGGCCTGTGAAGGG
AGCCCATATGTGCCAGTCCACTTTGATGCTTCTGTGGAGGACTCTACCTAA
PF00074
RnaseA
function
hydrolase activity
function
nucleic acid binding
function
hydrolase activity, acting on ester bonds
function
nuclease activity
function
endonuclease activity
function
endoribonuclease activity
function
endoribonuclease activity, producing 3'-phosphomonoesters
function
pancreatic ribonuclease activity
function
binding
function
catalytic activity
BE0002010
Dihydrofolate reductase
Escherichia coli (strain K12)
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
unknown
Dihydrofolate reductase
Coenzyme transport and metabolism
5,6,7,8-tetrahydrofolate + NADP(+) = 7,8- dihydrofolate + NADPH
folA
None
4.61
18000.0
Escherichia coli (strain K12)
GenBank Gene Database
J01609
GenBank Protein Database
146006
UniProtKB
P0ABQ4
UniProt Accession
DYR_ECOLI
EC 1.5.1.3
>Dihydrofolate reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNI
ILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVE
GDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>480 bp
ATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATG
CCGTGGAACCTGCCTGCCGATCTCGCCTGGTTTAAACGCAACACCTTAAATAAACCCGTG
ATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATT
ATCCTCAGCAGTCAACCGGGTACGGACGATCGCGTAACGTGGGTGAAGTCGGTGGATGAA
GCCATCGCGGCGTGTGGTGACGTACCAGAAATCATGGTGATTGGCGGCGGTCGCGTTTAT
GAACAGTTCTTGCCAAAAGCGCAAAAACTGTATCTGACGCATATCGACGCAGAAGTGGAA
GGCGACACCCATTTCCCGGATTACGAGCCGGATGACTGGGAATCGGTATTCAGCGAATTC
CACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAA
PF00186
DHFR_1
function
oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
function
oxidoreductase activity
function
dihydrofolate reductase activity
function
cofactor binding
function
coenzyme binding
function
NADP binding
function
binding
function
catalytic activity
function
oxidoreductase activity, acting on the CH-NH group of donors
process
amino acid metabolism
process
amino acid and derivative metabolism
process
nucleotide biosynthesis
process
glycine biosynthesis
process
serine family amino acid metabolism
process
physiological process
process
glycine metabolism
process
nucleobase, nucleoside, nucleotide and nucleic acid metabolism
process
metabolism
process
nucleotide metabolism
process
cellular metabolism
"
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owl:sameAs |
All properties reside in the graph file:///home/swish/src/ClioPatria/guidelines/drugbank_small.nt
The resource does not appear as an object