Local view for "http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugs/DB02443"
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rdfs:label |
"Methicillin Acyl-Serine"
|
ns1:description |
"
experimental
This compound belongs to the hippuric acid derivatives. These are compounds containing an hippuric acid or a derivative, with a structure characterized the presence of a benzoyl group linked to the N-terminal of a glycine.
Hippuric Acid Derivatives
Organic Compounds
Benzenoids
Benzene and Substituted Derivatives
Benzamides
N-acyl-alpha Amino Acids and Derivatives
Alpha Amino Acid Esters
Salicylamides
Tricarboxylic Acids and Derivatives
Benzoyl Derivatives
Anisoles
Alkyl Aryl Ethers
Thiazolidines
Hemiaminals
Secondary Carboxylic Acid Amides
Carboxylic Acid Esters
Carboxylic Acids
Thioethers
Dialkylamines
Polyamines
Enolates
Aminals
Carboxylic Acid Salts
Monoalkylamines
salicylamide
alpha-amino acid or derivative
salicylic acid or derivative
tricarboxylic acid derivative
anisole
phenol ether
benzoyl
alkyl aryl ether
thiazolidine
carboxylic acid ester
carboxamide group
hemiaminal
secondary carboxylic acid amide
ether
aminal
polyamine
thioether
secondary amine
carboxylic acid
carboxylic acid salt
enolate
carboxylic acid derivative
secondary aliphatic amine
primary amine
primary aliphatic amine
organonitrogen compound
amine
DB00563
Methotrexate
The penicillin increases the effect and toxicity of methotrexate
DB01017
Minocycline
Possible antagonism of action
DB00759
Tetracycline
Possible antagonism of action
logP
0.85
ALOGPS
logS
-2.7
ALOGPS
Water Solubility
9.49e-01 g/l
ALOGPS
logP
-4.6
ChemAxon
IUPAC Name
(2R,4R)-2-[(1S)-2-[(2R)-2-amino-2-carboxylatoethoxy]-1-[(2,6-dimethoxyphenyl)formamido]-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylate
ChemAxon
Traditional IUPAC Name
methicillin acyl-serine
ChemAxon
Molecular Weight
483.492
ChemAxon
Monoisotopic Weight
483.131150103
ChemAxon
SMILES
COC1=CC=CC(OC)=C1C(=O)N[C@H]([C@@H]1N[C@H](C([O-])=O)C(C)(C)S1)C(=O)OC[C@@H](N)C([O-])=O
ChemAxon
Molecular Formula
C20H25N3O9S
ChemAxon
InChI
InChI=1S/C20H27N3O9S/c1-20(2)14(18(27)28)23-16(33-20)13(19(29)32-8-9(21)17(25)26)22-15(24)12-10(30-3)6-5-7-11(12)31-4/h5-7,9,13-14,16,23H,8,21H2,1-4H3,(H,22,24)(H,25,26)(H,27,28)/p-2/t9-,13-,14-,16-/m1/s1
ChemAxon
InChIKey
InChIKey=GFYFFUGNPVBDAK-APGPQJPKSA-L
ChemAxon
Polar Surface Area (PSA)
192.17
ChemAxon
Refractivity
136.7
ChemAxon
Polarizability
46
ChemAxon
Rotatable Bond Count
11
ChemAxon
H Bond Acceptor Count
10
ChemAxon
H Bond Donor Count
3
ChemAxon
pKa (strongest acidic)
1.02
ChemAxon
pKa (strongest basic)
8.6
ChemAxon
Physiological Charge
-1
ChemAxon
Number of Rings
2
ChemAxon
Bioavailability
1
ChemAxon
Rule of Five
true
ChemAxon
PubChem Compound
46936385
PubChem Substance
46506281
ChemSpider
3676230
PDB
MC1
BE0001904
Beta-lactam-inducible penicillin-binding protein
Staphylococcus aureus
# Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17139284
# Imming P, Sinning C, Meyer A: Drugs, their targets and the nature and number of drug targets. Nat Rev Drug Discov. 2006 Oct;5(10):821-34. "Pubmed":http://www.ncbi.nlm.nih.gov/pubmed/17016423
unknown
Beta-lactam-inducible penicillin-binding protein
Cell wall/membrane/envelope biogenesis
pbp
None
9.59
76464.0
Staphylococcus aureus
GenBank Gene Database
Y00688
GenBank Protein Database
46629
UniProtKB
P07944
UniProt Accession
PBP_STAAU
>Beta-lactam-inducible penicillin-binding protein
MKKIKIVPLILIVVVVGFGIYFYASKDKEINNTIDAIEDKNFKQVYKDSSYISKSDNGEV
EMTERPIKIYNSLGVKDINIQDRKIKKVSKNKKRVDAQYKIKTNYGNIDRNVQFNFVKED
GMWKLDWDHSVIIPGMQKDQSIHIENLKSERGKILDRNNVELANTGTHMRLGIVPKNVSK
KDYKAIAKELSISEDYINNKWIKIGYKMIPSFHFKTVKKMDEYLSDFAKKFHLTTNETES
RNYPLGKATSHLLGYVGPINSEELKQKEYKGYKDDAVIGKKGLEKLYDKKLQHEDGYRVT
IVRVDDNSNTIAHTLIEKKKKDGKDIQLTIDAKVQKSIYNNMKNDYGSGTAIHPQTGELL
ALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPLLNKFQITTSPGSTQKILTAMIGLNNKT
LDDKTSYKIDGKGWQKDKSWGGYNVTRYEVVNGNIDLKQAIESSDNIFFARVALELGSKK
FEKGMKKLGVGEDIPSDYPFYNAQISNKNLDNEILLADSGYGQGEILINPVQILSIYSAL
ENNGNINAPHLLKDTKNKVWKKNIISKENINLLNDGMQQVVNKTHKEDIYRSYANLIGKS
GTAELKMKQGETGRQIGWFISYDKDNPNMMMAINVKDVQDKGMASYNAKISGKVYDELYE
NGNKKYDIDE
>2013 bp
ATGAAAAAGATAAAAATTGTTCCACTTATTTTAATAGTTGTAGTTGTCGGGTTTGGTATA
TATTTTTATGCTTCAAAAGATAAAGAAATTAATAATACTATTGATGCAATTGAAGATAAA
AATTTCAAACAAGTTTATAAAGATAGCAGTTATATTTCTAAAAGCGATAATGGTGAAGTA
GAAATGACTGAACGTCCGATAAAAATATATAATAGTTTAGGCGTTAAAGATATAAACATT
CAGGATCGTAAAATAAAAAAAGTATCTAAAAATAAAAAACGAGTAGATGCTCAATATAAA
ATTAAAACAAACTACGGTAACATTGATCGCAACGTTCAATTTAATTTTGTTAAAGAAGAT
GGTATGTGGAAGTTAGATTGGGATCATAGCGTCATTATTCCAGGAATGCAGAAAGACCAA
AGCATACATATTGAAAATTTAAAATCAGAACGTGGTAAAATTTTAGACCGAAACAATGTG
GAATTGGCCAATACAGGAACACATATGAGATTAGGCATCGTTCCAAAGAATGTATCTAAA
AAAGATTATAAAGCAATCGCTAAAGAACTAAGTATTTCTGAAGACTATATCAACAACAAA
TGGATCAAAATTGGGTACAAGATGATACCTTCGTTCCACTTTAAAACCGTTAAAAAAATG
GATGAATATTTAAGTGATTTCGCAAAAAAATTTCATCTTACAACTAATGAAACAGAAAGT
CGTAACTATCCTCTAGGAAAAGCGACTTCACATCTATTAGGTTATGTTGGTCCCATTAAC
TCTGAAGAATTAAAACAAAAAGAATATAAAGGCTATAAAGATGATGCAGTTATTGGTAAA
AAGGGACTCGAAAAACTTTACGATAAAAAGCTCCAACATGAAGATGGCTATCGTGTCACA
ATCGTTAGAGTCGACGATAATAGCAATACAATCGCACATACATTAATAGAGAAAAAGAAA
AAAGATGGCAAAGATATTCAACTAACTATTGATGCTAAAGTTCAAAAGAGTATTTATAAC
AACATGAAAAATGATTATGGCTCAGGTACTGCTATCCACCCTCAAACAGGTGAATTATTA
GCACTTGTAAGCACACCTTCATATGACGTCTATCCATTTATGTATGGCATGAGTAACGAA
GAATATAATAAATTAACCGAAGATAAAAAAGAACCTCTGCTCAACAAGTTCCAGATTACA
ACTTCACCAGGTTCAACTCAAAAAATATTAACAGCAATGATTGGGTTAAATAACAAAACA
TTAGACGATAAAACAAGTTATAAAATCGATGGTAAAGGTTGGCAAAAAGATAAATCTTGG
GGTGGTTACAACGTTACAAGATATGAAGTGGTAAATGGTAATATCGACTTAAAACAAGCA
ATAGAATCATCAGATAACATTTTCTTTGCTAGAGTAGCACTCGAATTAGGCAGTAAGAAA
TTTGAAAAAGGCATGAAAAAACTAGGTGTTGGTGAAGATATACCAAGTGATTATCCATTT
TATAATGCTCAAATTTCAAACAAAAATTTAGATAATGAAATATTATTAGCTGATTCAGGT
TACGGACAAGGTGAAATACTGATTAACCCAGTACAGATCCTTTCAATCTATAGCGCATTA
GAAAATAATGGCAATATTAACGCACCTCACTTATTAAAAGACACGAAAAACAAAGTTTGG
AAGAAAAATATTATTTCCAAAGAAAATATCAATCTATTAAATGATGGTATGCAACAAGTC
GTAAATAAAACACATAAAGAAGATATTTATAGATCTTATGCAAACTTAATTGGCAAATCC
GGTACTGCAGAACTCAAAATGAAACAAGGAGAAACTGGCAGACAAATTGGGTGGTTTATA
TCATATGATAAAGATAATCCAAACATGATGATGGCTATTAATGTTAAAGATGTACAAGAT
AAAGGAATGGCTAGCTACAATGCCAAAATCTCAGGTAAAGTGTATGATGAGCTATATGAG
AACGGTAATAAAAAATACGATATAGATGAATAA
PF03717
PBP_dimer
PF00905
Transpeptidase
PF05223
MecA_N
function
penicillin binding
function
binding
function
drug binding
process
response to drug
process
physiological process
process
response to antibiotic
process
cellular physiological process
process
cell organization and biogenesis
process
external encapsulating structure organization and biogenesis
process
cell wall organization and biogenesis
process
cell wall organization and biogenesis (sensu Bacteria)
process
cell wall biosynthesis (sensu Bacteria)
process
response to stimulus
process
response to abiotic stimulus
process
response to chemical stimulus
"
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ns1:interactsWith |
All properties reside in the graph file:///home/swish/src/ClioPatria/guidelines/drugbank_small.nt
The resource appears as object in 6 triples